PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G09770.1   Ribosomal protein L17 family protein
Lab Annot. Ribosomal protein L17 protein
Mapman: 29.2.1.1.3.2.17 protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L17
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64650.1 11Arabidopsis thaliana2E-10916094970 (0)M
AT3G54210.1 11Arabidopsis thaliana1E-281084766310 (244)C
Os01g62210.1 7Oryza sativa4E-9015182920 (0)M
Os05g38580.2 7Oryza sativa3E-8915181910 (0)M
Os05g38580.1 7Oryza sativa2E-6312476870 (0)M
Zm00001eb368030_P001 agpv5Zea mays8E-8115976860 (0)M
GRMZM2G112865_P01 3.21Zea mays8E-8115976860 (0)M
v1_GRMZM2G112865_P01 4a53Zea mays8E-8115976860 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ribosomal_L17(1)
TargetP: Mitochondria (Class 2 C0.093; M0.850; S0.026; _0.148)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 160 aa (-cTP 123)
Molecular Weight 18.45 kDA(-cTP )
PI 10.59(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 21841088(mitochondria (2DE native gel))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help