PPDB

The Plant Proteome Database

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AT5G09500.1   Ribosomal protein S19 family protein

Lab Annot. 40S ribosomal protein S15 (RPS15C)
Mapman: 29.2.1.2.1.15 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G09490.1 11Arabidopsis thaliana4E-9214884950 (0)_
AT5G43640.1 11Arabidopsis thaliana1E-8914893971 (1)_
AT5G09510.1 11Arabidopsis thaliana9E-881529295256 (190)_
Os07g08660.1 7Oryza sativa1E-90148859238 (38)_
Os03g58430.1 7Oryza sativa1E-82159768341 (41)_
Zm00001eb116850_P003 agpv5Zea mays2E-9014885930 (0)_
Zm00001eb116850_P001 agpv5Zea mays2E-9014885930 (0)_
Zm00001eb116850_P002 agpv5Zea mays2E-9014885930 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ribosomal_S19(1)
TargetP: Cytoplasm (Class 2 C0.063; M0.142; S0.096; _0.779)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 150 aa (-cTP 77)
Molecular Weight 16.75 kDA(-cTP )
PI 10.52(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2254Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17934214(cytosolic ribosome)
18814325(cotyledons)
19546170(mature pollen grains)
19888209(80S polysomal fraction)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help