PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G09420.1 translocon at the outer membrane of chloroplasts 64-V

Lab Annot.

Toc64-V or mtOM64
Mapman: 29.3.3 protein.targeting.chloroplast

Curated Location

mitochondria (Pubmed: 14741350 )

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G17970.1 11 Arabidopsis thaliana 0 565 51 67 22 (13) S
AT3G17970.2 11 Arabidopsis thaliana 1E-166 518 50 66 0 (0) S
AT1G08980.1 11 Arabidopsis thaliana 3E-121 414 47 62 156 (75) _
Os02g51810.1 7 Oryza sativa 0 595 54 72 0 (0) _
Os03g50010.1 7 Oryza sativa 0 596 52 67 17 (17) M
Os02g51810.2 7 Oryza sativa 3E-165 486 52 70 0 (0) _
Zm00001eb255310_P004 agpv5 Zea mays 0 550 53 71 0 (0) C
GRMZM2G159542_P02 3.21 Zea mays 0 550 53 71 0 (0) C
Zm00001eb054500_P003 agpv5 Zea mays 0 594 50 65 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Amidase(1) TPR_1(3) TPR_11(3) TPR_12(3) TPR_16(2) TPR_17(2) TPR_2(3) TPR_7(4) TP
TargetP:	Chloroplast (Class 5 C0.397; M0.047; S0.280; _0.140)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	603 aa (-cTP 572) (-lTP 522)
Molecular Weight	65.91 kDA(-cTP 62.70)(-lTP 57.11)
PI	8.99(-cTP 8.94)(-lTP 8.893)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
16618929(MITO/PLASTID-LOPIT-callus)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data