PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G09380.1   RNA polymerase III RPC4

Lab Annot.
Mapman: 27.3.50 RNA.regulation of transcription.General Transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G09380.2 11Arabidopsis thaliana8E-1592121001000 (0)_
AT5G09380.3 11Arabidopsis thaliana1E-1201651001000 (0)_
AT4G25180.1 11Arabidopsis thaliana5E-3817439620 (0)C
Os04g32350.1 7Oryza sativa7E-5123041590 (0)_
Os01g66580.1 7Oryza sativa3E-2511742680 (0)_
Zm00001eb085100_P001 agpv5Zea mays2E-5122141610 (0)_
Zm00001eb085100_P002 agpv5Zea mays2E-5122141610 (0)_
GRMZM2G025294_P01 3.21Zea mays2E-5122141610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNA_pol_Rpc4(2)
TargetP: Mitochondria (Class 5 C0.143; M0.435; S0.108; _0.243)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 216 aa (-cTP 199)
Molecular Weight 24.08 kDA(-cTP )
PI 5.06(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help