PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G09340.1 Ubiquitin family protein

Lab Annot.

Ubiquitin protein
Mapman: 29.5.11.1 protein.degradation.ubiquitin.ubiquitin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G05320.7 11 Arabidopsis thaliana 9E-09 79 36 53 0 (0) _
AT4G05050.4 11 Arabidopsis thaliana 9E-09 79 36 53 223 (175) _
AT2G35635.1 11 Arabidopsis thaliana 1E-08 79 36 53 259 (209) _
Os03g15370.2 7 Oryza sativa 3E-09 79 35 53 0 (0) _
Os06g44080.1 7 Oryza sativa 1E-08 79 36 53 107 (107) _
Os01g45400.1 7 Oryza sativa 1E-08 79 35 53 0 (0) _
GRMZM2G116292_P02 3.21 Zea mays 4E-09 79 36 53 216 (205) _
v1_GRMZM2G419891_P04 4a53 Zea mays 8E-09 79 36 53 208 (205) _
v1_GRMZM2G409726_P02 4a53 Zea mays 8E-09 79 36 53 208 (205) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3712(1) PA28_beta(1) Plexin_cytopl(1) Rad60-SLD(1) ubiquitin(1) Ubiquitin_2(1
TargetP:	Cytoplasm (Class 2 C0.135; M0.111; S0.148; _0.880)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	79 aa (-cTP 56)
Molecular Weight	9.09 kDA(-cTP )
PI	5.50(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data