PPDB

The Plant Proteome Database

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AT5G09270.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G09270.2 11Arabidopsis thaliana1E-781111001000 (0)_
Os01g64190.1 7Oryza sativa1E-238949660 (0)_
v1_GRMZM2G127180_P01 4a53Zea mays9E-249046680 (0)_
GRMZM2G127180_P01 3.21Zea mays9E-249046680 (0)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CcmD(1) DUF3899(1) INSIG(1)
TargetP: Cytoplasm (Class 2 C0.195; M0.079; S0.114; _0.915)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 111 aa (-cTP 20)
Molecular Weight 12.60 kDA(-cTP )
PI 9.19(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help