PPDB

The Plant Proteome Database

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AT5G09260.1   vacuolar protein sorting-associated protein 20.2

Lab Annot.
Mapman: 27.3.71 RNA.regulation of transcription.SNF7
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G63880.1 11Arabidopsis thaliana6E-127221859210 (4)_
AT5G63880.2 11Arabidopsis thaliana2E-12124577833 (2)_
AT2G19830.2 11Arabidopsis thaliana5E-0810731530 (0)_
Os02g38300.1 7Oryza sativa9E-103230678110 (10)_
Os02g38300.2 7Oryza sativa7E-100210698410 (10)_
Os11g03060.1 7Oryza sativa1E-069629560 (0)_
v1_GRMZM2G122983_P01 4a53Zea mays1E-10323168814 (4)_
Zm00001eb183830_P002 agpv5Zea mays1E-10323168810 (0)_
GRMZM2G122983_P01 3.21Zea mays1E-10323168816 (6)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1269(2) Exonuc_VII_L(1) IL34(1) Snf7(1) TINF2_N(1)
TargetP: Cytoplasm (Class 3 C0.032; M0.299; S0.063; _0.815)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 216 aa (-cTP 206)
Molecular Weight 24.61 kDA(-cTP )
PI 4.78(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help