PPDB

The Plant Proteome Database

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AT5G09250.1   ssDNA-binding transcriptional regulator

Lab Annot. ssDNA-binding transcriptional regulator
Mapman: 27.3.50 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G09250.4 11Arabidopsis thaliana3E-59881001000 (0)_
AT5G09250.5 11Arabidopsis thaliana1E-53811001000 (0)_
AT5G09250.2 11Arabidopsis thaliana1E-53811001000 (0)_
Os02g34840.1 7Oryza sativa2E-268556700 (0)M
Os02g34830.1 7Oryza sativa3E-248556700 (0)M
Os01g50960.1 7Oryza sativa1E-167343647 (7)_
Zm00001eb243600_P001 agpv5Zea mays4E-228548680 (0)_
v1_GRMZM2G090213_P02 4a53Zea mays4E-228548681 (1)_
GRMZM2G090213_P02 3.21Zea mays4E-228548682 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4894(1) PC4(1)
TargetP: Cytoplasm (Class 2 C0.058; M0.245; S0.100; _0.883)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 107 aa (-cTP 94)
Molecular Weight 12.08 kDA(-cTP )
PI 6.73(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help