PPDB

The Plant Proteome Database

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AT5G08780.1   winged-helix DNA-binding transcription factor family protein

Lab Annot.
Mapman: 28.1.3 DNA.synthesis/chromatin structure.histone
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G18035.1 11Arabidopsis thaliana3E-0652506121 (12)_
AT1G48620.1 11Arabidopsis thaliana5E-0649486342 (38)C
AT3G18035.2 11Arabidopsis thaliana8E-065349600 (0)_
Os08g33190.1 7Oryza sativa9E-0858467024 (24)_
Os09g23730.1 7Oryza sativa3E-0774405926 (26)_
Zm00001eb427820_P001 agpv5Zea mays4E-105648670 (0)_
GRMZM2G427106_P01 3.21Zea mays5E-105648670 (0)_
v1_GRMZM2G427106_P01 4a53Zea mays5E-105648670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Linker_histone(1) Stork_head(1)
TargetP: Cytoplasm (Class 4 C0.381; M0.077; S0.074; _0.632)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 457 aa (-cTP 448)
Molecular Weight 51.32 kDA(-cTP )
PI 7.42(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help