PPDB

PPDB	The Plant Proteome Database

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AT5G08720.1 polyketide cyclase/dehydrase/lipid transporter

Lab Annot.

HCF145 (psbAUTR stabilisation)
Mapman: 29.8 protein.protein assembly and cofactor ligation

Curated Location

plastid stroma (Pubmed: 26307378 )

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G01650.2 11 Arabidopsis thaliana 2E-21 183 36 53 11 (11) _
AT4G01650.1 11 Arabidopsis thaliana 7E-21 183 36 53 11 (11) C
AT4G01650.3 11 Arabidopsis thaliana 1E-17 122 42 58 0 (0) C
Os03g62170.1 7 Oryza sativa 0 650 64 76 0 (0) C
Os03g62170.2 7 Oryza sativa 0 436 63 74 0 (0) C
Os01g74010.2 7 Oryza sativa 2E-13 157 36 50 4 (4) C
Zm00001eb063890_P002 agpv5 Zea mays 0 682 62 73 0 (0) C
Zm00001eb063890_P001 agpv5 Zea mays 0 599 63 74 0 (0) C
GRMZM2G167428_P01 3.21 Zea mays 0 707 56 67 6 (6) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	COXG(2) Polyketide_cyc(2) Polyketide_cyc2(3)
TargetP:	Chloroplast (Class 3 C0.687; M0.048; S0.170; _0.157)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	719 aa (-cTP 662)
Molecular Weight	81.92 kDA(-cTP 75.88)
PI	8.26(-cTP 7.34)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data