PPDB

 The Plant Proteome Database

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AT5G08620.1   DEA(D/H)-box RNA helicase family protein
Lab Annot. DEAD box RNA helicase (RH25) (STR2)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08610.1 11Arabidopsis thaliana0499889378 (68)C
AT5G63630.2 11Arabidopsis thaliana047481900 (0)M
AT5G63630.1 11Arabidopsis thaliana047481901 (1)_
Os01g43120.1 7Oryza sativa0472688437 (37)C
Os01g43130.1 7Oryza sativa047968834 (4)_
Os06g33520.1 7Oryza sativa048666803 (3)M
GRMZM2G041732_P01 3.21Zea mays048969835 (5)M
Zm00001eb383060_P004 agpv5Zea mays048969830 (0)M
v1_GRMZM2G041732_P01 4a53Zea mays048969839 (9)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_22(2) DEAD(1) Helicase_C(2) ResIII(1)
TargetP: Cytoplasm (Class 2 C0.226; M0.079; S0.052; _0.842)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 563 aa (-cTP 547)
Molecular Weight 62.49 kDA(-cTP )
PI 9.80(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help