PPDB

The Plant Proteome Database

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AT5G08600.1   U3 ribonucleoprotein (Utp) family protein

Lab Annot. U3 ribonucleoprotein (Utp) protein
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08600.2 11Arabidopsis thaliana083498980 (0)C
AT5G08600.3 11Arabidopsis thaliana061099990 (0)C
AT4G02400.1 11Arabidopsis thaliana084270811 (1)_
Os03g22320.1 7Oryza sativa080846622 (2)_
Zm00001eb016440_P001 agpv5Zea mays084542610 (0)_
Zm00001eb016440_P002 agpv5Zea mays084843600 (0)_
v1_GRMZM2G158676_P01 4a53Zea mays2E-94619385613 (13)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CdiI_2(2) Utp14(1)
TargetP: Chloroplast (Class 5 C0.398; M0.356; S0.044; _0.171)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 822 aa (-cTP 788)
Molecular Weight 93.47 kDA(-cTP 89.78)
PI 5.45(-cTP 5.20)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help