PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G08550.1   GC-rich sequence DNA-binding factor-like protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G09210.1 11Arabidopsis thaliana3E-15832775820 (0)_
Os03g63670.1 7Oryza sativa0981425913 (13)_
Os03g63670.2 7Oryza sativa0981425913 (13)_
Zm00001eb064800_P001 agpv5Zea mays099342600 (0)_
Zm00001eb064800_P003 agpv5Zea mays099342600 (0)_
GRMZM5G832651_P01 3.21Zea mays0992415913 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GCFC(1) IBB(2) Vir_act_alpha_C(4)
TargetP: Cytoplasm (Class 2 C0.061; M0.211; S0.004; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 908 aa (-cTP 864)
Molecular Weight 100.77 kDA(-cTP )
PI 5.94(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19114538(guard cells Arabidopsis leaf)
20813957(SUMO proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help