PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G08510.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G44230.1 11 Arabidopsis thaliana 3E-126 504 40 61 0 (0) C
AT1G33350.2 11 Arabidopsis thaliana 8E-120 501 36 59 0 (0) _
AT1G33350.1 11 Arabidopsis thaliana 8E-120 501 36 59 0 (0) _
Os06g03570.2 7 Oryza sativa 5E-150 500 47 65 0 (0) M
Os05g36350.1 7 Oryza sativa 1E-118 477 37 62 0 (0) C
Os04g01990.1 7 Oryza sativa 6E-117 489 39 56 0 (0) M
v1_GRMZM2G071742_P01 4a53 Zea mays 1E-131 501 45 61 0 (0) M
Zm00001eb378710_P001 agpv5 Zea mays 3E-131 501 45 61 0 (0) M
GRMZM5G882758_P01 3.21 Zea mays 3E-131 501 45 61 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	3Beta_HSD(1) DYW_deaminase(1) PPR(10) PPR_1(9) PPR_2(10) PPR_3(8) PPR_long(2) TP
TargetP:	Cytoplasm (Class 3 C0.013; M0.435; S0.074; _0.889)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	511 aa (-cTP 498)
Molecular Weight	58.04 kDA(-cTP )
PI	8.06(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data