PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G08460.1   GDSL-like Lipase/Acylhydrolase superfamily protein

Lab Annot.
Mapman: 26.28 misc.GDSL-motif lipase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G71250.1 11Arabidopsis thaliana2E-12935752661 (1)S
AT1G29670.1 11Arabidopsis thaliana1E-1173674967466 (234)S
AT1G29670.2 11Arabidopsis thaliana1E-11636749670 (0)M
Os08g02094.1 7Oryza sativa2E-10535446640 (0)S
Os05g44200.1 7Oryza sativa5E-102338466311 (11)S
Os01g52770.1 7Oryza sativa2E-101365446115 (15)S
Zm00001eb153170_P001 agpv5Zea mays9E-10534146650 (0)S
GRMZM2G045215_P01 3.21Zea mays9E-10534146655 (5)S
v1_GRMZM2G045215_P01 4a53Zea mays9E-10534146654 (4)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lipase_GDSL(1) Nbl1_Borealin_N(1) Phage_Treg(2)
TargetP: Secreted (Class 3 C0.006; M0.025; S0.938; _0.535)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 385 aa (-cTP 351)
Molecular Weight 42.42 kDA(-cTP )
PI 5.08(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help