PPDB

The Plant Proteome Database

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AT5G08450.1   zinc finger CCCH domain protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08450.2 11Arabidopsis thaliana09181001003 (2)_
AT5G08450.3 11Arabidopsis thaliana09181001003 (2)_
Os07g29450.1 7Oryza sativa2E-3756631478 (8)C
Zm00001eb108610_P002 agpv5Zea mays088746630 (0)C
Zm00001eb108610_P003 agpv5Zea mays088746630 (0)C
GRMZM2G464000_P03 3.21Zea mays088746630 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Rxt3(3)
TargetP: Cytoplasm (Class 3 C0.316; M0.087; S0.004; _0.808)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 918 aa (-cTP 858)
Molecular Weight 104.15 kDA(-cTP )
PI 7.06(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21515685(GreenCut2)

Comparative Proteomics Data


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