PPDB

The Plant Proteome Database

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AT5G08440.1   transmembrane protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08440.2 11Arabidopsis thaliana072699990 (0)_
AT5G08440.3 11Arabidopsis thaliana076994940 (0)_
AT5G23490.1 11Arabidopsis thaliana075566760 (0)_
Os05g01060.1 7Oryza sativa3E-9525560737 (7)_
Os01g01800.2 7Oryza sativa2E-9225656731 (1)_
Os01g01800.1 7Oryza sativa7E-9125756731 (1)_
Zm00001eb267700_P004 agpv5Zea mays078843590 (0)_
Zm00001eb267700_P001 agpv5Zea mays078843590 (0)_
GRMZM2G036206_P01 3.21Zea mays5E-17678642583 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lebercilin(3) Tup_N(3) Wtap(2)
TargetP: Cytoplasm (Class 2 C0.025; M0.212; S0.033; _0.963)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 726 aa (-cTP 704)
Molecular Weight 80.56 kDA(-cTP )
PI 5.38(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help