PPDB

 The Plant Proteome Database

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AT5G08415.1   Radical SAM superfamily protein
Lab Annot. lipoyl synthase -lip1 plastid
Mapman: 18.11 Co-factor and vitamine metabolism.lipoic acid
Curated Location plastid (Pubmed: 23198870 12062419 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20860.2 11Arabidopsis thaliana5E-12028859780 (0)M
AT2G20860.3 11Arabidopsis thaliana5E-12028859780 (0)M
AT2G20860.1 11Arabidopsis thaliana5E-120288597818 (9)M
Os05g43576.1 7Oryza sativa4E-17431374840 (0)M
Os01g56310.1 7Oryza sativa6E-16631275850 (0)C
Os04g38330.1 7Oryza sativa2E-12231756730 (0)M
Zm00001eb370140_P001 agpv5Zea mays5E-17131574860 (0)M
GRMZM2G039982_P01 3.21Zea mays5E-17131574863 (3)M
v1_GRMZM2G039982_P01 4a53Zea mays5E-17131574863 (3)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: LIAS_N(2) Radical_SAM(1)
TargetP: Chloroplast (Class 2 C0.850; M0.102; S0.023; _0.119)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 394 aa (-cTP 358)
Molecular Weight 43.62 kDA(-cTP 39.42)
PI 8.00(-cTP 6.16)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 20706207(contaminants cell cycle interactome (cell culture))
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help