PPDB

The Plant Proteome Database

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AT5G08400.2   structural maintenance of chromosomes-like protein%2C putative (DUF3531)

Lab Annot. unknown protein with DUF3532
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08400.1 11Arabidopsis thaliana0333909011 (1)C
AT4G29400.1 11Arabidopsis thaliana1E-5922242611 (0)C
Os02g58120.1 7Oryza sativa6E-12824072880 (0)M
Os01g37820.1 7Oryza sativa6E-4320938590 (0)C
Zm00001eb190770_P002 agpv5Zea mays1E-13024573880 (0)C
GRMZM2G006006_P01 3.21Zea mays1E-130245738818 (18)C
Zm00001eb190770_P005 agpv5Zea mays3E-12824972870 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3531(1)
TargetP: Chloroplast (Class 5 C0.316; M0.124; S0.101; _0.124)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 300 aa (-cTP 240)
Molecular Weight 34.07 kDA(-cTP 27.53)
PI 5.91(-cTP 5.87)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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