PPDB

The Plant Proteome Database

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AT5G08400.1   structural maintenance of chromosomes-like protein%2C putative (DUF3531)

Lab Annot. unknown protein with DUF3531
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08400.2 11Arabidopsis thaliana033390909 (1)C
AT4G29400.1 11Arabidopsis thaliana6E-5919445661 (0)C
Os02g58120.1 7Oryza sativa2E-12127364780 (0)M
Os01g37820.1 7Oryza sativa8E-4119540610 (0)C
Zm00001eb190770_P002 agpv5Zea mays1E-12327864780 (0)C
GRMZM2G006006_P01 3.21Zea mays1E-123278647818 (18)C
Zm00001eb190770_P005 agpv5Zea mays3E-12128263770 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3531(1)
TargetP: Chloroplast (Class 4 C0.368; M0.103; S0.107; _0.160)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 333 aa (-cTP 273)
Molecular Weight 37.98 kDA(-cTP 31.44)
PI 6.47(-cTP 6.98)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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