PPDB

PPDB	The Plant Proteome Database

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AT5G08380.1 alpha-galactosidase 1

Lab Annot.

alpha-galactosidase, melibiase (ATAGAL1 )
Mapman: 3.8.2 minor CHO metabolism.galactose.alpha-galactosidases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G08380.2 11 Arabidopsis thaliana 0 316 100 100 0 (0) S
AT5G08370.1 11 Arabidopsis thaliana 0 364 65 79 4 (4) S
AT5G08370.2 11 Arabidopsis thaliana 0 366 65 79 4 (4) _
Os10g35070.1 7 Oryza sativa 0 389 65 78 0 (0) S
Os10g35110.1 7 Oryza sativa 1E-168 363 61 74 9 (9) S
Os10g35110.2 7 Oryza sativa 1E-168 363 61 74 9 (9) S
GRMZM2G095126_P01 3.21 Zea mays 0 372 68 80 3 (3) S
Zm00001eb044860_P002 agpv5 Zea mays 0 372 68 80 0 (0) S
v1_GRMZM2G095126_P01 4a53 Zea mays 0 372 68 80 12 (12) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Melibiase(1) Melibiase_2(1) Melibiase_2_C(1) Melibiase_C(2) Raffinose_syn(1)
TargetP:	Secreted (Class 1 C0.031; M0.053; S0.928; _0.043)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	410 aa (-cTP 388)
Molecular Weight	45.71 kDA(-cTP )
PI	6.19(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
351	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
871	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1202	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1409	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2184	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2185	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2266	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 wild-type
2400	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

15593128(Cell Wall proteome)
18538804(apoplast)
18998720(SA-induced secreted proteome (cell culture))
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data