PPDB

The Plant Proteome Database

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AT5G08260.1   serine carboxypeptidase-like 35

Lab Annot. SCPL35 (serine carboxypeptidase-like 35)
Mapman: 29.5.5.5.1* protein.degradation.serine protease.SC.S10
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G23210.1 11Arabidopsis thaliana5E-179454527158 (30)S
AT1G11080.2 11Arabidopsis thaliana7E-16548949640 (0)S
AT1G11080.1 11Arabidopsis thaliana7E-16548949640 (0)S
Os02g42310.1 7Oryza sativa0458537131 (31)S
Os04g44410.1 7Oryza sativa1E-17147452651 (1)_
Os02g42310.2 7Oryza sativa3E-156393537231 (31)_
GRMZM2G062179_P01 3.21Zea mays048256710 (0)S
v1_GRMZM2G062179_P01 4a53Zea mays048256710 (0)S
Zm00001eb076810_P002 agpv5Zea mays048256710 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_S10(1)
TargetP: Secreted (Class 3 C0.075; M0.158; S0.666; _0.096)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 480 aa (-cTP 450)
Molecular Weight 53.61 kDA(-cTP )
PI 7.98(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2047Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help