PPDB

The Plant Proteome Database

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AT5G08200.1   peptidoglycan-binding LysM domain-containing protein

Lab Annot. peptidoglycan-binding LysM domain
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G23130.1 11Arabidopsis thaliana4E-16741865752 (2)M
Os10g34420.1 7Oryza sativa2E-6239839520 (0)_
Os03g01990.1 7Oryza sativa6E-4434436470 (0)_
Os06g51360.1 7Oryza sativa1E-3833734510 (0)_
Zm00001eb221300_P001 agpv5Zea mays8E-5733640540 (0)_
v1_GRMZM2G048559_P01 4a53Zea mays8E-5733640540 (0)_
GRMZM2G048559_P01 3.21Zea mays8E-5733640540 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LysM(1)
TargetP: Cytoplasm (Class 4 C0.153; M0.360; S0.006; _0.616)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 409 aa (-cTP 370)
Molecular Weight 44.85 kDA(-cTP )
PI 8.83(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help