PPDB

The Plant Proteome Database

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AT5G08190.1   nuclear factor Y%2C subunit B12

Lab Annot.
Mapman: 27.3.13 RNA.regulation of transcription.CCAAT box binding factor family, DR1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08190.2 11Arabidopsis thaliana7E-11716399990 (0)_
AT5G23090.1 11Arabidopsis thaliana3E-10415989940 (0)_
AT5G23090.2 11Arabidopsis thaliana3E-10415989940 (0)_
Os08g29500.1 7Oryza sativa1E-7614676871 (1)_
Os08g29500.2 7Oryza sativa2E-7315671821 (1)_
Os01g61810.3 6Oryza sativa1E-1911239660 (0)_
Zm00001eb178500_P001 agpv5Zea mays3E-7714577860 (0)_
v1_GRMZM2G147712_P01 4a53Zea mays3E-7714577862 (2)_
GRMZM2G147712_P01 3.21Zea mays3E-7714577860 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBFD_NFYB_HMF(1) CENP-W(1) Histone(2)
TargetP: Cytoplasm (Class 1 C0.101; M0.083; S0.080; _0.938)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 163 aa (-cTP 129)
Molecular Weight 18.36 kDA(-cTP )
PI 4.59(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help