PPDB

The Plant Proteome Database

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AT5G08139.1   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08139.2 11Arabidopsis thaliana02751001000 (0)_
AT5G60820.1 11Arabidopsis thaliana2E-6737447600 (0)_
AT3G02340.1 11Arabidopsis thaliana8E-3428535470 (0)_
Os12g02620.1 7Oryza sativa4E-3816546580 (0)_
Os11g02670.1 7Oryza sativa4E-3616544580 (0)_
Os02g49550.1 7Oryza sativa2E-2722638510 (0)_
v1_GRMZM2G466823_P01 4a53Zea mays4E-3311954680 (0)_
Zm00001eb195510_P001 agpv5Zea mays4E-3311954680 (0)_
GRMZM5G886096_P01 3.21Zea mays4E-3311954680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FANCL_C(1) Nop25(2) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1)
TargetP: Cytoplasm (Class 2 C0.159; M0.106; S0.088; _0.881)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 376 aa (-cTP 366)
Molecular Weight 41.96 kDA(-cTP )
PI 3.85(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help