PPDB

The Plant Proteome Database

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AT5G08130.3   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman:
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08130.7 11Arabidopsis thaliana04081001000 (0)M
AT5G08130.1 11Arabidopsis thaliana040999991 (1)_
AT5G08130.5 11Arabidopsis thaliana04081001001 (1)M
Os08g38210.4 7Oryza sativa1E-4724945560 (0)_
Os09g29930.2 7Oryza sativa3E-4725142560 (0)_
Os08g38210.5 7Oryza sativa1E-4624545560 (0)_
GRMZM2G089501_P05 3.21Zea mays6E-5027740570 (0)_
v1_GRMZM2G089501_P05 4a53Zea mays6E-5027740570 (0)_
GRMZM2G009478_P06 3.21Zea mays2E-4926341570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1)
TargetP: Cytoplasm (Class 3 C0.272; M0.020; S0.012; _0.867)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 408 aa (-cTP 340)
Molecular Weight 45.42 kDA(-cTP )
PI 6.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1538Detail       leaf [A. thaliana] plastid RNCs thylakoid membranewild-type

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help