PPDB

 The Plant Proteome Database

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AT5G08130.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Lab Annot.
Mapman: 17.3.2.99 hormone metabolism.brassinosteroid.signal transduction.other
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08130.8 11Arabidopsis thaliana04091001000 (0)M
AT5G08130.4 11Arabidopsis thaliana04091001001 (1)M
AT5G08130.2 11Arabidopsis thaliana04091001001 (1)M
Os08g38210.4 7Oryza sativa6E-4724944570 (0)_
Os09g29930.2 7Oryza sativa5E-4625141560 (0)_
Os08g38210.5 7Oryza sativa6E-4624544570 (0)_
GRMZM2G089501_P05 3.21Zea mays9E-5027740560 (0)_
v1_GRMZM2G089501_P05 4a53Zea mays9E-5027740560 (0)_
GRMZM2G009478_P06 3.21Zea mays1E-4826441560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HLH(1)
TargetP: Cytoplasm (Class 3 C0.272; M0.020; S0.012; _0.867)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 409 aa (-cTP 341)
Molecular Weight 45.55 kDA(-cTP )
PI 6.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1538Detail       leaf [A. thaliana] plastid RNCs thylakoid membranewild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 20813957(SUMO proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help