PPDB

PPDB	The Plant Proteome Database

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AT5G08110.1 UBQ%2C helicase-c and DEAD-like helicase domain-containing protein

Lab Annot.

nucleic acid binding;ATP-dependent helicases
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G08110.2 11 Arabidopsis thaliana 0 1144 99 99 0 (0) _
AT5G08110.3 11 Arabidopsis thaliana 0 1175 97 97 0 (0) _
AT2G40700.1 11 Arabidopsis thaliana 1E-09 440 21 38 0 (0) _
Os02g02150.1 7 Oryza sativa 0 835 53 69 0 (0) M
Os07g41564.1 7 Oryza sativa 0 820 52 65 1 (1) _
Os07g41570.1 7 Oryza sativa 7E-127 368 53 69 0 (0) _
Zm00001eb327130_P001 agpv5 Zea mays 0 846 57 71 0 (0) _
GRMZM2G082205_P01 3.21 Zea mays 0 714 58 71 0 (0) _
v1_GRMZM2G082205_P01 4a53 Zea mays 0 714 58 71 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(2) DUF1998(1) Helicase_C(2) Rad60-SLD(1) ResIII(1) ubiquitin(1) Ubiquitin_4
TargetP:	Cytoplasm (Class 2 C0.100; M0.094; S0.019; _0.894)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1141 aa (-cTP 1093)
Molecular Weight	126.46 kDA(-cTP )
PI	8.57(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data