PPDB

 The Plant Proteome Database

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AT5G08030.1   PLC-like phosphodiesterases superfamily protein
Lab Annot.
Mapman: 11.9.3.3 lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08030.2 11Arabidopsis thaliana03721001000 (0)M
AT1G74210.1 11Arabidopsis thaliana036975847 (3)M
AT5G58170.1 11Arabidopsis thaliana7E-1933325430 (0)S
Os01g55780.1 7Oryza sativa035872840 (0)S
Os03g40670.1 7Oryza sativa037268830 (0)S
Os07g41150.1 7Oryza sativa1E-16735265760 (0)M
Zm00001eb050070_P002 agpv5Zea mays033971840 (0)S
GRMZM2G153274_P01 3.21Zea mays034674860 (0)S
Zm00001eb370370_P001 agpv5Zea mays034674860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: GDPD(1)
TargetP: Secreted (Class 5 C0.044; M0.379; S0.482; _0.003)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 372 aa (-cTP 342)
Molecular Weight 42.88 kDA(-cTP )
PI 5.54(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to flower)
19200160(flower-stage 12)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help