PPDB

PPDB	The Plant Proteome Database

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AT5G07910.1 Leucine-rich repeat (LRR) family protein

Lab Annot.

leucine-rich repeat (LRR) protein
Mapman: 35.1 not assigned.no ontology

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G30105.1 11 Arabidopsis thaliana 1E-54 251 39 57 2 (1) _
AT2G17440.1 11 Arabidopsis thaliana 4E-23 171 36 61 0 (0) _
AT1G12970.1 11 Arabidopsis thaliana 2E-20 151 38 61 0 (0) _
Os03g11360.2 7 Oryza sativa 2E-116 261 61 82 0 (0) C
Os03g11360.1 7 Oryza sativa 6E-79 198 58 82 0 (0) C
Os03g11360.3 7 Oryza sativa 6E-79 198 58 82 0 (0) C
Zm00001eb008470_P005 agpv5 Zea mays 8E-111 261 60 81 0 (0) C
Zm00001eb008470_P002 agpv5 Zea mays 5E-108 269 58 78 0 (0) C
Zm00001eb008470_P004 agpv5 Zea mays 5E-104 291 54 72 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	LRR_1(6) LRR_4(5) LRR_5(1) LRR_6(4) LRR_8(4) LRR_9(2) VPS53_C(1)
TargetP:	Mitochondria (Class 5 C0.230; M0.416; S0.011; _0.362)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	262 aa (-cTP 258)
Molecular Weight	29.14 kDA(-cTP )
PI	6.34(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
351	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1409	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data