PPDB

The Plant Proteome Database

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AT5G07900.1   Mitochondrial transcription termination factor family protein

Lab Annot. mTERF domain protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location mitochondria (Pubmed: 21464319 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G21150.1 11Arabidopsis thaliana3E-7333039600 (0)C
AT1G21150.2 11Arabidopsis thaliana2E-7233039610 (0)_
AT1G21150.3 11Arabidopsis thaliana2E-7132739610 (0)C
Os05g33440.1 7Oryza sativa3E-5333531510 (0)M
Os07g24090.1 7Oryza sativa4E-5133331540 (0)M
Os02g51450.2 7Oryza sativa7E-4232928508 (8)M
Zm00001eb178450_P001 agpv5Zea mays7E-4733930550 (0)M
GRMZM2G012999_P01 3.21Zea mays2E-4636928500 (0)M
Zm00001eb287710_P002 agpv5Zea mays2E-4636928500 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Docking(1) mTERF(2) tRNA-synt_1c(2)
TargetP: Chloroplast (Class 4 C0.490; M0.106; S0.038; _0.075)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 405 aa (-cTP 345) (-lTP 272)
Molecular Weight 45.85 kDA(-cTP 39.21)(-lTP 31.19)
PI 9.18(-cTP 8.52)(-lTP 8.604)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)

Comparative Proteomics Data


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