PPDB

 The Plant Proteome Database

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AT5G07830.1   glucuronidase 2
Lab Annot. beta-glucuronidase (ATGUS2)
Mapman: 35.1 not assigned.no ontology
Curated Location
TAIR curated location: cell wall (sensu Magnoliophyta)16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61250.2 11Arabidopsis thaliana054372840 (0)S
AT5G61250.1 11Arabidopsis thaliana054372840 (0)S
AT5G61250.3 11Arabidopsis thaliana054372840 (0)S
Os12g38920.1 7Oryza sativa053060770 (0)S
Os12g38920.2 7Oryza sativa053060770 (0)S
Os03g11320.1 7Oryza sativa053954740 (0)S
Zm00001eb136200_P003 agpv5Zea mays052559770 (0)M
GRMZM2G098397_P03 3.21Zea mays0525597712 (9)M
v1_GRMZM2G098397_P03 4a53Zea mays052559777 (7)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_79n(1) Leu_Phe_trans(1)
TargetP: Secreted (Class 2 C0.005; M0.193; S0.972; _0.036)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 543 aa (-cTP 519)
Molecular Weight 60.25 kDA(-cTP )
PI 9.08(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1613Detail       Natural Senescence leaf [A. thaliana]  
1614Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
1617Detail        [A. thaliana] m48
1618Detail        [A. thaliana] m48
1619Detail        [A. thaliana] m48
1620Detail        [A. thaliana] m48
1621Detail        [A. thaliana] m48
1622Detail        [A. thaliana] m48
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 15593128(Cell Wall proteome)
17526915(glycoproteome cell wall (stems))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help