PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G07810.1 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein

Lab Annot.

Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G48310.2 11 Arabidopsis thaliana 2E-76 546 32 50 0 (0) _
AT1G48310.1 11 Arabidopsis thaliana 2E-76 546 32 50 4 (4) _
AT1G48310.3 11 Arabidopsis thaliana 8E-75 504 33 50 0 (0) _
Os07g40730.1 7 Oryza sativa 0 1214 47 63 0 (0) M
Os07g40730.2 7 Oryza sativa 0 1183 48 64 0 (0) M
Os07g40730.3 7 Oryza sativa 0 1132 47 63 0 (0) M
Zm00001eb326710_P001 agpv5 Zea mays 0 1236 47 63 0 (0) _
GRMZM2G313553_P01 3.21 Zea mays 0 789 44 60 0 (0) M
v1_GRMZM2G313553_P01 4a53 Zea mays 0 789 44 60 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_22(1) Helicase_C(1) HNH(2) HNH_5(1) ResIII(2) SNF2_N(1) SpoIIIAH(2)
TargetP:	Cytoplasm (Class 3 C0.213; M0.229; S0.013; _0.647)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	1194 aa (-cTP 1127)
Molecular Weight	134.84 kDA(-cTP )
PI	6.37(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data