PPDB

The Plant Proteome Database

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AT5G07660.1   structural maintenance of chromosomes 6A

Lab Annot. structural maintenance of chromosomes 6A
Mapman: 31.2 cell.division
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61460.1 11Arabidopsis thaliana0105173861 (0)C
AT5G15920.1 11Arabidopsis thaliana2E-1173821400 (0)_
AT3G54670.1 11Arabidopsis thaliana2E-06111335114 (4)_
Os09g03370.1 7Oryza sativa9E-5211770820 (0)_
Os05g51790.1 7Oryza sativa1E-0915627460 (0)M
Os05g51790.2 7Oryza sativa1E-0915627460 (0)M
GRMZM2G025340_P01 3.21Zea mays0104151710 (0)_
Zm00001eb309160_P001 agpv5Zea mays0104151710 (0)_
v1_GRMZM2G025340_P01 4a53Zea mays0104151710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_13(5) AAA_15(1) AAA_21(1) AAA_23(1) AAA_27(3) AAA_29(1) ABC_tran(1) Bacillus
TargetP: Cytoplasm (Class 3 C0.336; M0.103; S0.046; _0.877)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1058 aa (-cTP 982)
Molecular Weight 122.19 kDA(-cTP )
PI 7.20(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1472Detail       leaf [A. thaliana] co-IP GST stroma clps (rep. 1-2)

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help