PPDB

PPDB	The Plant Proteome Database

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AT5G07640.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G19610.1 11 Arabidopsis thaliana 7E-84 307 45 59 0 (0) _
AT2G19610.2 11 Arabidopsis thaliana 1E-83 307 45 59 0 (0) _
AT5G60250.1 11 Arabidopsis thaliana 5E-50 318 34 52 0 (0) _
Os12g01230.1 7 Oryza sativa 3E-21 212 29 46 0 (0) S
Os11g01240.1 7 Oryza sativa 9E-20 211 28 45 0 (0) S
Os09g25200.1 7 Oryza sativa 2E-12 162 31 42 0 (0) S
Zm00001eb194870_P001 agpv5 Zea mays 4E-30 309 27 47 0 (0) S
Zm00001eb194870_P002 agpv5 Zea mays 8E-30 309 27 47 0 (0) S
GRMZM2G020996_P01 3.21 Zea mays 8E-30 309 27 47 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IBR(3) RNase_H(1) RVT_3(1) zf-C3HC4(2) zf-C3HC4_2(2) zf-RING_2(2) zf-RING_5(3) z
TargetP:	Cytoplasm (Class 4 C0.056; M0.093; S0.297; _0.508)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	316 aa (-cTP 295)
Molecular Weight	35.73 kDA(-cTP )
PI	4.88(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data