PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G07530.1   glycine rich protein 17

Lab Annot. glycine rich protein 17
Mapman: 35.1.40 not assigned.no ontology.glycine rich proteins
Curated Location
TAIR curated location: extracellular matrix & extracellular region11431566
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G07530.3 11Arabidopsis thaliana054395950 (0)C
AT5G07530.2 11Arabidopsis thaliana047498980 (0)C
AT5G07520.1 11Arabidopsis thaliana3E-2811851670 (0)S
Os04g46200.1 7Oryza sativa2E-076448600 (0)_
v1_GRMZM2G337229_P01 4a53Zea mays2E-086448600 (0)_
Zm00001eb074940_P001 agpv5Zea mays2E-086448600 (0)_
GRMZM2G337229_P01 3.21Zea mays2E-086448600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Oleosin(1)
TargetP: Chloroplast (Class 5 C0.428; M0.383; S0.001; _0.146)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 543 aa (-cTP 502)
Molecular Weight 53.19 kDA(-cTP 48.52)
PI 10.34(-cTP 10.31)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help