PPDB

The Plant Proteome Database

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AT5G07500.1   Zinc finger C-x8-C-x5-C-x3-H type family protein

Lab Annot.
Mapman: 27.3.12 RNA.regulation of transcription.C3H zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G58620.1 11Arabidopsis thaliana2E-5412163770 (0)S
AT2G41900.1 11Arabidopsis thaliana8E-5412163771 (1)_
AT5G12850.1 11Arabidopsis thaliana1E-5112162760 (0)_
Os03g49170.1 7Oryza sativa2E-5212163760 (0)_
Os03g49170.3 7Oryza sativa2E-5212163760 (0)_
Os05g10670.1 7Oryza sativa2E-5110771790 (0)M
Zm00001eb216910_P002 agpv5Zea mays1E-5212162760 (0)_
v1_GRMZM2G180979_P01 4a53Zea mays1E-5212163761 (1)_
GRMZM2G180979_P01 3.21Zea mays1E-5212163760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Torus(1) zf-CCCH(3) zf-CCCH_4(3) zf_CCCH_4(4)
TargetP: Cytoplasm (Class 3 C0.178; M0.081; S0.253; _0.788)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 245 aa (-cTP 242)
Molecular Weight 28.18 kDA(-cTP )
PI 6.75(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help