PPDB

 The Plant Proteome Database

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AT5G07430.1   Pectin lyase-like superfamily protein
Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G07420.1 11Arabidopsis thaliana036178870 (0)S
AT1G69940.1 11Arabidopsis thaliana036166800 (0)S
AT5G61680.1 11Arabidopsis thaliana2E-17936066781 (1)S
Os05g44600.1 7Oryza sativa5E-8433141600 (0)S
Os01g53990.1 7Oryza sativa3E-8331341610 (0)S
Os07g41650.1 7Oryza sativa5E-8030040620 (0)S
Zm00001eb153600_P002 agpv5Zea mays2E-8531641610 (0)M
GRMZM2G120779_P01 3.21Zea mays2E-8331041610 (0)S
v1_GRMZM2G120779_P01 4a53Zea mays2E-8331041610 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Pectinesterase(1)
TargetP: Secreted (Class 2 C0.047; M0.015; S0.859; _0.163)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 361 aa (-cTP 341)
Molecular Weight 39.91 kDA(-cTP )
PI 8.98(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help