PPDB

 The Plant Proteome Database

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AT5G07340.1   Calreticulin family protein
Lab Annot. calnexin
Mapman: 30.3 signalling.calcium
Curated Location not plastid
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G07340.2 11Arabidopsis thaliana0540989821 (19)S
AT5G61790.1 11Arabidopsis thaliana05348390263 (242)S
AT1G56340.2 11Arabidopsis thaliana4E-584123751184 (150)S
Os04g32950.1 7Oryza sativa0463758972 (72)S
Os04g32950.2 7Oryza sativa0442769072 (72)_
Os04g32950.3 7Oryza sativa0429768965 (65)S
Zm00001eb084590_P001 agpv5Zea mays051371860 (0)S
v1_GRMZM2G134668_P02 4a53Zea mays0513718666 (65)S
GRMZM2G134668_P02 3.21Zea mays0513718657 (57)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Calreticulin(1) OAD_gamma(2)
TargetP: Secreted (Class 1 C0.004; M0.052; S0.986; _0.056)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 532 aa (-cTP 511)
Molecular Weight 60.49 kDA(-cTP )
PI 4.74(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1625Detail       Rosettes [A. thaliana] Wild-type
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2249Detail       seedlings [A. thaliana] total tissue gfs9
2298Detail        [A. thaliana] Clp C1 WT
2319Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 15028209(Total chloroplast)
16618929(ER-LOPIT-callus)
17293592(total seedlings û light and dark grown)
17151019(vacuole - suspension cell)
17432890(leaf total membranes)
17660356(tonoplast (Brassica oleracea buds))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data

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