PPDB

PPDB	The Plant Proteome Database

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AT5G07250.1 RHOMBOID-like protein 3

Lab Annot.

rhomboid protease 3 (AtRBL3)
Mapman: 29.5.5.10* protein.degradation.serine protease ST.S54

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G07250.2 11 Arabidopsis thaliana 0 346 86 86 0 (0) _
AT1G63120.1 11 Arabidopsis thaliana 1E-137 323 62 78 0 (0) _
AT2G29050.1 11 Arabidopsis thaliana 3E-136 296 63 78 0 (0) _
Os09g35730.1 7 Oryza sativa 5E-150 295 70 83 49 (49) _
Os08g43320.1 7 Oryza sativa 2E-146 296 69 82 24 (24) _
Os03g02530.1 7 Oryza sativa 5E-146 326 61 75 0 (0) _
Zm00001eb319050_P001 agpv5 Zea mays 3E-141 327 64 77 0 (0) _
GRMZM2G116514_P01 3.21 Zea mays 3E-141 327 64 77 17 (17) _
v1_GRMZM2G116514_P01 4a53 Zea mays 3E-141 327 64 77 12 (12) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CcmH(2) DUF4231(3) GP41(2) Holin_BlyA(2) LapA_dom(4) Rhomboid(1)
TargetP:	Cytoplasm (Class 2 C0.175; M0.038; S0.005; _0.918)
Predotar:
Subcel. Location:
TM-HMM prediction:	7 TMs
Aramemnon:	7 TMs
TAT position:
Length	346 aa (-cTP 275)
Molecular Weight	38.49 kDA(-cTP )
PI	9.35(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data