PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G07120.1 sorting nexin 2B

Lab Annot.

sorting nexin 2B
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G07120.2 11 Arabidopsis thaliana 0 572 100 100 0 (0) _
AT5G07120.3 11 Arabidopsis thaliana 0 547 100 100 0 (0) _
AT5G58440.1 11 Arabidopsis thaliana 0 587 81 87 14 (13) _
Os05g27920.1 7 Oryza sativa 0 435 64 80 0 (0) _
Os01g61150.1 7 Oryza sativa 2E-110 458 45 60 0 (0) M
Os05g39680.1 7 Oryza sativa 2E-103 433 47 64 8 (8) _
GRMZM2G141760_P01 3.21 Zea mays 0 510 57 74 31 (1) _
Zm00001eb286350_P001 agpv5 Zea mays 0 510 57 74 0 (0) _
v1_GRMZM2G141760_P01 4a53 Zea mays 0 510 57 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arfaptin(1) BAR_3_WASP_bdg(2) Nitrate_red_del(2) PX(1) SspH(1) TMEM171(1) Vps5(1
TargetP:	Cytoplasm (Class 2 C0.178; M0.069; S0.026; _0.892)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	572 aa (-cTP 510)
Molecular Weight	64.28 kDA(-cTP )
PI	5.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1446	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data