PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G07110.1   prenylated RAB acceptor 1.B6

Lab Annot. prenylated RAB acceptor 1.B6
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G01640.1 11Arabidopsis thaliana2E-6619752700 (0)C
AT2G38360.1 11Arabidopsis thaliana6E-6520049677 (6)C
AT3G56110.1 11Arabidopsis thaliana2E-61191506826 (24)C
Os05g39670.1 7Oryza sativa2E-54161567328 (28)C
Os11g01610.1 7Oryza sativa4E-4919252666 (6)C
Os12g01690.1 7Oryza sativa1E-4619350650 (0)C
Zm00001eb351940_P002 agpv5Zea mays1E-5619950650 (0)C
Zm00001eb351940_P001 agpv5Zea mays1E-5619950650 (0)C
GRMZM5G831519_P01 3.21Zea mays1E-56199506514 (14)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BatA(2) MtN3_slv(2) PRA1(1)
TargetP: Chloroplast (Class 4 C0.668; M0.127; S0.031; _0.465)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 216 aa (-cTP 178)
Molecular Weight 23.14 kDA(-cTP 19.15)
PI 7.98(-cTP 7.03)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help