PPDB

PPDB	The Plant Proteome Database

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AT5G07040.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G53110.1 11 Arabidopsis thaliana 3E-31 130 42 62 0 (0) S
AT3G61550.1 11 Arabidopsis thaliana 7E-30 181 38 51 0 (0) _
AT5G06490.1 11 Arabidopsis thaliana 2E-28 177 35 51 0 (0) _
Os12g04130.1 7 Oryza sativa 6E-32 153 47 63 0 (0) C
Os07g06560.1 7 Oryza sativa 7E-21 143 32 52 0 (0) _
Os05g45060.1 7 Oryza sativa 8E-21 95 49 64 0 (0) S
Zm00001eb213300_P001 agpv5 Zea mays 4E-34 163 38 56 0 (0) _
GRMZM2G028188_P01 3.21 Zea mays 4E-34 163 38 56 0 (0) _
v1_GRMZM2G028188_P01 4a53 Zea mays 4E-34 163 38 56 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) RINGv(1) Tmpp129(1) zf-ANAPC11(1) zf-C3H2C3(1) zf-C3HC4(1) zf-
TargetP:	Secreted (Class 2 C0.020; M0.073; S0.788; _0.130)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	159 aa (-cTP 120)
Molecular Weight	17.21 kDA(-cTP )
PI	6.09(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data