PPDB

The Plant Proteome Database

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AT5G06970.1   plant/protein (DUF810)

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G11670.4 11Arabidopsis thaliana0111735530 (0)M
AT4G11670.3 11Arabidopsis thaliana0114934520 (0)M
AT4G11670.1 11Arabidopsis thaliana0112234530 (0)M
Os03g47930.1 7Oryza sativa01115648021 (21)_
Os09g17760.1 7Oryza sativa8E-137868325217 (17)M
Os10g33240.1 7Oryza sativa4E-10398027470 (0)_
GRMZM2G439950_P03 3.21Zea mays01026637813 (13)_
v1_GRMZM2G439950_P03 4a53Zea mays0102663787 (7)_
GRMZM2G439950_P01 3.21Zea mays01029637813 (13)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Membr_traf_MHD(1) UNC_13_homolog(1)
TargetP: Cytoplasm (Class 3 C0.061; M0.366; S0.033; _0.877)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1101 aa (-cTP 1080)
Molecular Weight 124.52 kDA(-cTP )
PI 5.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2009Detail       leaf [A. thaliana] total leaf tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help