PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G06960.1   OCS-element binding factor 5

Lab Annot.
Mapman: 27.3.35 RNA.regulation of transcription.bZIP transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G06960.2 11Arabidopsis thaliana03301001000 (0)_
AT5G06960.3 11Arabidopsis thaliana031099990 (0)_
AT3G12250.1 11Arabidopsis thaliana033083920 (0)_
Os01g59350.1 7Oryza sativa3E-17133273870 (0)M
Os01g17260.1 7Oryza sativa1E-16733173840 (0)_
Os01g17260.2 7Oryza sativa1E-16733173840 (0)_
GRMZM2G030280_P02 3.21Zea mays6E-16933173860 (0)_
Zm00001eb332590_P003 agpv5Zea mays6E-16933173860 (0)_
Zm00001eb369280_P003 agpv5Zea mays9E-16932873870 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: bZIP_1(1) bZIP_2(1) bZIP_Maf(2) DOG1(1) IclR(1) Ribosomal_L35p(1)
TargetP: Cytoplasm (Class 2 C0.146; M0.053; S0.050; _0.940)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 330 aa (-cTP 275)
Molecular Weight 36.89 kDA(-cTP )
PI 8.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help