PPDB

 The Plant Proteome Database

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AT5G06870.1   polygalacturonase inhibiting protein 2
Lab Annot. polygalacturonase inhibiting protein 2 (PGIP2)
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
TAIR curated location: cell wall (sensu Magnoliophyta)16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G06860.1 11Arabidopsis thaliana2E-180330768621 (19)S
AT3G12145.1 11Arabidopsis thaliana5E-107329506846 (23)S
AT3G12610.1 11Arabidopsis thaliana8E-5234334500 (0)S
Os05g01430.1 7Oryza sativa7E-8431244620 (0)S
Os05g01444.1 7Oryza sativa3E-8333543610 (0)M
Os05g01380.1 7Oryza sativa2E-7931143590 (0)S
GRMZM2G088531_P01 3.21Zea mays3E-9532644630 (0)S
v1_GRMZM2G088531_P01 4a53Zea mays3E-9532644630 (0)S
GRMZM2G025105_P01 3.21Zea mays3E-9231447620 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: FNIP(2) LRR_1(7) LRR_4(6) LRR_6(8) LRR_8(6) LRRNT_2(1)
TargetP: Secreted (Class 3 C0.026; M0.026; S0.850; _0.344)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 330 aa (-cTP 263)
Molecular Weight 37.07 kDA(-cTP )
PI 9.02(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
2214Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2398Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/35SRecA-GFP
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 14595688(Cell Wall proteome)
16287169(Cell Wall proteome)
15593128(Cell Wall proteome)
17526915(glycoproteome cell wall (stems))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data

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