PPDB

 The Plant Proteome Database

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AT5G06730.1   Peroxidase superfamily protein
Lab Annot.
Mapman: 26.12 misc.peroxidases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G06720.1 11Arabidopsis thaliana033584900 (0)S
AT2G38380.1 11Arabidopsis thaliana8E-132317567416 (13)S
AT3G32980.1 11Arabidopsis thaliana2E-123343517039 (38)S
Os03g13200.1 7Oryza sativa4E-13130558730 (0)S
Os03g13180.1 7Oryza sativa1E-12230656700 (0)S
Os03g13210.1 7Oryza sativa1E-11632552720 (0)S
v1_GRMZM2G116846_P01 4a53Zea mays5E-12732654714 (4)S
GRMZM2G116846_P01 3.21Zea mays5E-12732654710 (0)S
Zm00001eb009940_P001 agpv5Zea mays5E-12732654710 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: peroxidase(1)
TargetP: Secreted (Class 3 C0.207; M0.019; S0.693; _0.015)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 358 aa (-cTP 314)
Molecular Weight 37.29 kDA(-cTP )
PI 4.48(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 17151019(vacuole - suspension cell)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help