PPDB

The Plant Proteome Database

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AT5G06650.1   C2H2 and C2HC zinc fingers superfamily protein

Lab Annot.
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G58070.1 11Arabidopsis thaliana7E-2325634460 (0)_
AT2G41940.1 11Arabidopsis thaliana4E-1912343550 (0)_
AT1G68360.1 11Arabidopsis thaliana5E-114862751 (1)_
Os02g53530.1 7Oryza sativa1E-1613240500 (0)_
Os08g36110.1 7Oryza sativa2E-169643520 (0)C
Os06g10470.1 7Oryza sativa2E-155364790 (0)_
Zm00001eb256600_P002 agpv5Zea mays1E-1912242550 (0)_
v1_GRMZM2G085945_P02 4a53Zea mays1E-1912244570 (0)_
v1_GRMZM2G085945_P01 4a53Zea mays1E-1912244570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: zf-C2H2(1) zf-C2H2_4(1) zf-C2H2_6(1) zf-C2HE(1)
TargetP: Cytoplasm (Class 1 C0.033; M0.126; S0.114; _0.928)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 191 aa (-cTP 181)
Molecular Weight 22.47 kDA(-cTP )
PI 9.22(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help