PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G66520.1 11 Arabidopsis thaliana 0 624 42 64 4 (4) _
AT5G48910.1 11 Arabidopsis thaliana 2E-177 621 41 61 4 (4) C
AT5G40405.2 11 Arabidopsis thaliana 3E-170 614 40 62 0 (0) _
Os07g44299.1 7 Oryza sativa 2E-152 579 41 59 0 (0) _
Os01g08120.1 7 Oryza sativa 1E-150 518 42 65 0 (0) M
Os03g60690.1 7 Oryza sativa 2E-148 612 37 57 0 (0) C
v1_GRMZM2G175253_P01 4a53 Zea mays 3E-157 610 40 61 0 (0) M
GRMZM2G175253_P01 3.21 Zea mays 3E-157 610 40 61 0 (0) M
GRMZM2G114572_P01 3.21 Zea mays 2E-156 543 42 62 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AsiA(1) DUF4003(2) DYW_deaminase(2) PPR(10) PPR_1(8) PPR_2(9) PPR_3(8) PPR_long(
TargetP:	Secreted (Class 5 C0.001; M0.430; S0.444; _0.315)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	622 aa (-cTP 601)
Molecular Weight	70.49 kDA(-cTP )
PI	8.17(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data