PPDB

PPDB	The Plant Proteome Database

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AT5G06530.1 ABC-2 type transporter family protein

Lab Annot.

ABC-2 type transporter protein
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G06530.2 11 Arabidopsis thaliana 0 751 100 100 2 (2) _
AT5G06530.3 11 Arabidopsis thaliana 0 691 98 99 2 (2) _
AT3G52310.1 11 Arabidopsis thaliana 0 751 68 80 0 (0) C
Os03g06139.1 7 Oryza sativa 0 682 73 83 0 (0) _
Os11g07600.1 7 Oryza sativa 2E-170 629 42 61 0 (0) _
Os06g40550.1 7 Oryza sativa 1E-167 643 44 59 0 (0) _
Zm00001eb004340_P001 agpv5 Zea mays 0 460 75 85 0 (0) _
v1_GRMZM2G028070_P01 4a53 Zea mays 0 746 68 78 0 (0) _
Zm00001eb004340_P002 agpv5 Zea mays 0 746 67 78 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_16(1) AAA_18(1) AAA_21(2) AAA_22(1) AAA_25(1) AAA_28(1) AAA_29(1) AAA_30(1)
TargetP:	Cytoplasm (Class 3 C0.124; M0.154; S0.006; _0.604)
Predotar:
Subcel. Location:
TM-HMM prediction:	5 TMs
Aramemnon:	6 TMs
TAT position:
Length	751 aa (-cTP 663)
Molecular Weight	82.93 kDA(-cTP )
PI	9.26(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data